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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790470.1_cds_XP_016501938.1_1473
CDS Infomation

[gene=LOC107820200] [db_xref=GeneID:107820200] [protein=probable WRKY transcription factor 20 isoform X3] [protein_id=XP_016501938.1] [location=complement(join(4513..4613,4653..4957,10506..10661,10754..10922,11001..11929,15108..15115))] [gbkey=CDS]
Sequence

ATGTACTGGATAATGGGTACCCCTAGAGAAGAGGCAACAAACAAAGTTCCCTCCGAGAAT
TTACAGCCGAAGCCAGACACTGATCCTGACCCTGCAACCAACAACCCAGAGTTAAAAGAG
AAAGGGAGCTGTGAATCAATCTCAGCTGATGTTGTTTCTGGTGAATTGCAGAAGAGACTG
AGTCCTGCTACTGACGCACAAGCATCAAAAAGTAATCAAGAGGAAACTACACATCCTTCA
ACATGCCAAGACGTGTCAAATAATGTGTCACAATCTAATCAAGAAGATATTTCTCTTTCT
AAAGTACAAGAGTACCAGTCAGAAACTGTGCGGCAGAAACAGGGTCTTAAGAGTGAGGGT
GATGCATCTGGATGTAGTCATCTTCTTATTTTACCAAAGGACTCAGATGCAAAGTCATGT
GGATCAGAATCTGGTGTAATAGAGAAAGTGGTTTCCCCATTATCTAATAAGGCATCAAAT
TCTTCAGATCAAATACAAAGTCAGACCATGGAGGTAGTTGTATCACGATCTGATCAACAA
CTAGTGACTTATCCCGCAAGGCCTGAGAAAACTTTGGATAAGTTGCAACCGAGGCGAAAC
CCTGATACTAGTGGCCATGGGTTGCCATCTGATCGTGGTAATACTCTCTTCAAGTTACCT
GAAAAACCATTAGAAGATGGATATAACTGGCGAAAGTATGGTCAGAAGCTTGTCAGAGGA
AATGAGTTTACTCGGAGTTATTATAAGTGCACATACCCTAATTGCCTAGCAAAAAAGCAA
GTGGAGAGATCACATGACGGGCATATTACAGATGTCCACTATATTGGGAAGCATGAACAT
CCGAAAACTCCAAGTGGTCCGCAGACCCCCCCTGGATTGGTGGTCCCTTTGCAAATGAGA
CAACCAGACATTCCAATGCTCACTGCATCAGAAGAAGCTGAAGGCGAGAAATCTACTGTG
CCTGGAGAAACATGTGAACCTAGTAAGCCATCAGAGGCCCCGCTTGCATTGGACATTGTA
TCACCTGCTATGCAGGTTACGCCTTTGAAGCCACATAAATTAGAAAATGAGGTGGATAAG
AATCGTGGTCCAGACTCAAAAAGACAAAAAAAAGATATAGCTAAGGATGATACTCCACCT
ATTAAGTCCCATAGTGAACCACGGCACATTGTTCAGACCGTGAGCGAAGTAGATATAGTC
AACGATGGTCACCGCTGGCGCAAATATGGGCAAAAATTTGTAAAAGGCAATCCAAATCCA
AGGAGTTACTACAGATGCTCAATTGCTGGTTGCCCTGTGAAGAAGCATGTGGAGAGGGCA
TCCCATGATCCAAAAATGGTCATTACAACATATGAAGGGCAGCATGACCATACCATGTCA
TGGTTTAGGACTTTAAGCCAAATTACAGCGGCGCCTGATCTCAGTTTAACAGGCGTAAGT
GGAGAATCCAGATTGGAATCAGGTGAAACCAAACATGTATCTCAATCGGGTGAAACCAAA
CATATCGGAGAGTCCAAAGTTGAATCAGGTGAAAACAAACATGTCGGAGAGTCCAAATCT
GAATCAGGTGAAAACAAACATGTTGGAGAGTCAAGAATTGAATCAGGTGAATCGGGTGAA
AACAAACATGTTAATATTGACATGGTTGTTCATATTGGTGCAAATTGA

Peptide Sequence

PEP ID

XP_016501938.1
PEP Infomation

PREDICTED: probable WRKY transcription factor 20 isoform X3 [Nicotiana tabacum]
Sequence

MYWIMGTPREEATNKVPSENLQPKPDTDPDPATNNPELKEKGSCESISADVVSGELQKRL
SPATDAQASKSNQEETTHPSTCQDVSNNVSQSNQEDISLSKVQEYQSETVRQKQGLKSEG
DASGCSHLLILPKDSDAKSCGSESGVIEKVVSPLSNKASNSSDQIQSQTMEVVVSRSDQQ
LVTYPARPEKTLDKLQPRRNPDTSGHGLPSDRGNTLFKLPEKPLEDGYNWRKYGQKLVRG
NEFTRSYYKCTYPNCLAKKQVERSHDGHITDVHYIGKHEHPKTPSGPQTPPGLVVPLQMR
QPDIPMLTASEEAEGEKSTVPGETCEPSKPSEAPLALDIVSPAMQVTPLKPHKLENEVDK
NRGPDSKRQKKDIAKDDTPPIKSHSEPRHIVQTVSEVDIVNDGHRWRKYGQKFVKGNPNP
RSYYRCSIAGCPVKKHVERASHDPKMVITTYEGQHDHTMSWFRTLSQITAAPDLSLTGVS
GESRLESGETKHVSQSGETKHIGESKVESGENKHVGESKSESGENKHVGESRIESGESGE
NKHVNIDMVVHIGAN

Transcript Sequence

Gene sequence data has not been registered.